nf-core/diaproteomics

Automated quantitative analysis of DIA proteomics mass spectrometry measurements.

data-independent-proteomicsdia-proteomicsopenmsproteomics

These pages are for an old version of the pipeline (1.2.0). The latest stable release is 1.2.4 .

This pipeline uses DSL1. It will not work with Nextflow versions after 22.10.6. Learn more.

Launch version 1.2.0 https://github.com/nf-core/diaproteomics

Name Last Modified Size

openswathworkflow_output/ pipeline_info/ pyprophet_output/ spectral_library_files/

ComparisonPlot.pdf

about 4 years 3.46 MB

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Hela_B.csv

about 4 years 9.34 MB

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Hela_charge_stats.pdf

about 4 years 7.82 kB

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Hela_peptide_quantities.csv

about 4 years 25.5 MB

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Hela_peptide_quantities.pdf

about 4 years 785 kB

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Hela_protein_peptide_stats.pdf

about 4 years 4.61 kB

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Hela_rt_deviation.pdf

about 4 years 159 kB

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NA_comparison_A-B.csv

about 4 years 525 kB

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NA_msstats_results.csv

about 4 years 552 kB

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VolcanoPlot.pdf

about 4 years 243 kB

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msstats-1.log

about 4 years 4.29 kB

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msstats.log

about 4 years 56.4 kB

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